In my case, I just waited.
After around 5 mins, compile was done with this message:
ar: no archive members specified
usage: ar -d [-TLsv] archive file ...
ar -m [-TLsv] archive file ...
ar -m [-abiTLsv] position archive file ...
ar -p [-TLsv] archive [file ...]
ar -q [-cTLsv] archive file ...
ar -r [-cuTLsv] archive file ...
ar -r [-abciuTLsv] position archive file ...
ar -t [-TLsv] archive [file ...]
ar -x [-ouTLsv] archive [file ...]
install.com> CHARMM Installation is completed.
The CHARMM executable is /Users//c38b2/exec/osx/charmm.
install.com> Phase 3 completed.
late 2012 iMac, OS: Yosemite
Last edited by shanKim; 11/13/14 08:02 AM.